Package: ace2fastq 0.6.0

ace2fastq: ACE File to FASTQ Converter

The ACE file format is used in genomics to store contigs from sequencing machines. This tools converts it into FASTQ format. Both formats contain the sequence characters and their corresponding quality information. Unlike the FASTQ file, the ace file stores the quality values numerically. The conversion algorithm uses the standard Sanger formula. The package facilitates insertion into pipelines, and content inspection.

Authors:Reinhard Simon [aut, cre]

ace2fastq_0.6.0.tar.gz
ace2fastq_0.6.0.zip(r-4.5)ace2fastq_0.6.0.zip(r-4.4)ace2fastq_0.6.0.zip(r-4.3)
ace2fastq_0.6.0.tgz(r-4.4-any)ace2fastq_0.6.0.tgz(r-4.3-any)
ace2fastq_0.6.0.tar.gz(r-4.5-noble)ace2fastq_0.6.0.tar.gz(r-4.4-noble)
ace2fastq_0.6.0.tgz(r-4.4-emscripten)ace2fastq_0.6.0.tgz(r-4.3-emscripten)
ace2fastq.pdf |ace2fastq.html
ace2fastq/json (API)
NEWS

# Install 'ace2fastq' in R:
install.packages('ace2fastq', repos = c('https://c5sire.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/c5sire/ace2fastq/issues

On CRAN:

3.70 score 7 scripts 217 downloads 1 exports 8 dependencies

Last updated 2 years agofrom:8d247f4211. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 15 2024
R-4.5-winOKOct 15 2024
R-4.5-linuxOKOct 15 2024
R-4.4-winOKOct 15 2024
R-4.4-macOKOct 15 2024
R-4.3-winOKOct 15 2024
R-4.3-macOKOct 15 2024

Exports:ace_to_fastq

Dependencies:cligluelifecyclemagrittrrlangstringistringrvctrs

Tutorial

Rendered fromTutorial.Rmdusingknitr::rmarkdownon Oct 15 2024.

Last update: 2023-01-21
Started: 2019-05-28

Readme and manuals

Help Manual

Help pageTopics
ace_to_fastqace_to_fastq
ace2fastqace2fastq
print.ace2fastqprint.ace2fastq